Okay, I tried loading optimized defaults in the bios. Same thing, no wake. I then took a look around the bios settings, and found wake up events sub-menu in the advanced settings menu. There are events for usb keyboard/mouse, PS/2, PCIe devices, ect. They are all disabled by default. Enabled them and all is working now
Kinda odd they are disabled by default. Usually usb and PS/2 are enabled by default, with WOL and other options usually disabled by default.
Anyway, my problem is solved. Thanks for all the help from the people who posted in this thread